Difference between revisions of "Main Page"

Revision as of 16:57, 12 June 2018 (view source) Davina Barron (talk | contribs) (→‎Papers) ← Older edit		Revision as of 17:16, 12 June 2018 (view source) Boni Al-Haruni (talk | contribs) Newer edit →
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	=== Data Mining ===		=== Data Mining ===
−	*[https://drive.google.com/file/d/0B2ht_TCS6xC-Z0s2MzZndzFKb1U/view?usp=sharing Project Outline]
	=== Machine Learning Group ===		=== Machine Learning Group ===
−	*[https://drive.google.com/file/d/0B2ht_TCS6xC-d3lraWpzSmZXa2c/view?usp=sharing Project Outline]
	==== Papers ====		==== Papers ====
−	*[https://drive.google.com/file/d/0B2ht_TCS6xC-bXVkS0d4MW9EcDg/view?usp=sharing Bush et al. (2016) Unravelling the Human Genome]
−	*[https://drive.google.com/file/d/0B2ht_TCS6xC-SF9IWlVDZTlkSEE/view?usp=sharing AAndreu-Perez et al. (2015) Big Data for Health]
−	*[https://drive.google.com/file/d/0B2ht_TCS6xC-QlozUVZ4bG1NUm8/view?usp=sharing Madigan et al. (2014) A Systematic Approach to Evaluating Evidence from Observational Studies]
−	*[https://drive.google.com/file/d/0B2ht_TCS6xC-UnVzSEJGbVNYbG8/view?usp=sharing Collins et al. (2015) A New Initiative on Precision Medicine]
	=== Genomics Group ===		=== Genomics Group ===
−	*[https://drive.google.com/file/d/0B2ht_TCS6xC-WWxIVUJ5SDA1MUU/view?usp=sharing Project Outline]
−
−	==== Papers ====
−
−	===== ''Population Genetics'' =====
−	* 1000GenomesProject.pdf
−	* CavalliSforzaHGDP2005.pdf
−	* LiHGDP2008.pdf
−	* NovemberNature2008
−
−	===== ''Single Cell RNA'' =====
−	* Macosko_MouseRetinaDropSeq.pdf
−	* Single cells make big data.pdf
−
−	===== ''Transcriptomics'' =====
−	* GamazonPrediXcan2015.pdf
−	* GusevTWAS2016.pdf
	==== Online videos to better understand genetics and genomics ====		==== Online videos to better understand genetics and genomics ====
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	=== Imaging Group ===		=== Imaging Group ===
−	*[https://drive.google.com/file/d/0B2ht_TCS6xC-QlBuM3l4b0dSdTA/view?usp=sharing Project Outline]
	== 2018 Presentations ==		== 2018 Presentations ==

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Revision as of 17:16, 12 June 2018

Welcome to the U-M Big Data Summer Institute 2018 Wiki!

Consult the User's Guide for information on using the wiki software.

Reading Material

Data Mining

Machine Learning Group

Papers

Genomics Group

Online videos to better understand genetics and genomics

Genetics

• Introduction to Genetics by 23andMe (5 videos)
• TED-Ed : How Mendel's pea plants helped us understand genetics - Hortensia Jiménez Díaz
• Genetic Recombination and Gene Mapping by Bozeman Science
• Useful Genetics : A college-level comprehensive genetics course with 292 lectures offered by Rosie Redfield at UBC

Useful 3D Animations

• From DNA to protein - 3D Animation
• DNA Transcription - 3D Animation
• DNA splicing - 3D Animation
• mRNA Translation - 3D Animation
• How DNA is packaged - 3D Animation
• The Central Dogma - 3D Animation

Gene Regulation and Epigenetics

• Epigenetics Lecture by SciShow
• Hi-C Technique : A 3D map of the Human Genome
• The ENCODE Project
• RNAi by Nature Video

Sequencing Technologies

• TED-Ed : The race to sequence the human genome - Tien Nguyen
• DropSeq - Droplet-based Single Cell Sequencing by McCarroll Lab

Imaging Group

2018 Presentations

Week 1

Day 0: June 17

• Orientation Slides 2018 - Bhramar Mukherjee, PhD

Day 1: June 18

• Welcome Slides 2018 - Bhramar Mukherjee, PhD

Day 2: June 19

Day 3: June 20

Day 4: June 21

Day 5: June 22

Week 2

Day 6: June 25

Day 7: June 26

Day 8: June 27

Day 9: June 28

Day 10: June 29

Week 3

Day 11: July 2

Day 12: July 3

Day 13: July 4 (NO CLASS)

Day 14: July 5

Day 15: July 6

Week 4

Day 16: July 9

Day 17: July 10

Day 18: July 11

Day 19: July 12

Day 20: July 13

Week 5

Day 21: July 16

Day 22: July 17

Day 23: July 18

Day 24: July 19

Day 25: July 20

Week 6

Day 26: July 23

Day 27: July 24

Day 28: July 25

Day 29: Symposium

Student Poster Presentations

Additional Resources

• DataCamp Resources